Some simulated haplotype count data from 1000 individuals and 500 genes
test_data.RdThis file is the result of the simulate_data.R script, saved for faster bootstrap testing. When simulated, there is no dependence between the coding allele and the sqtl allele, so the result of the test should be null
Format
A data frame with about 15,000 rows and 4 columns
- gene
simulated gene name
- indv
simulated individual name
- haplotype
The simulated haplotype with 'a' and 'A' being high and low included alleles, and 'b' and 'B' being rare and common coding variant alleles.
- qtl_af
The frequency of the 'penetrance driving' QTL qllele. i.e. lower splicing or higher expression allele.
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